An Interactive Multiscale Synteny Visualization Tool for McScanX.
SynVisio offers different types of visualizations such as Linear Parallel plots, Hive plots, Stacked Parallel Plots and Dot plots. Users can configure the type of plots required and then choose the source and the target chromosomes that need to be mapped. Users also have option to download the generated visualizations in publication ready SVG or PNG formats.
Reference: Venkat Bandi, and Carl Gutwin. 2020. Interactive Exploration of Genomic Conservation. In Proceedings of the 46th Graphics Interface Conference on Proceedings of Graphics Interface 2020 (GI’20). Canadian Human-Computer Communications Society, Waterloo, CAN.
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Chromosome search